Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828882.1_cds_XP_016503543.1_17078
CDS Infomation

[gene=LOC107821621] [db_xref=GeneID:107821621] [protein=uridine kinase-like protein 1, chloroplastic] [protein_id=XP_016503543.1] [location=complement(join(26654..26800,26899..26981,27365..27437,27522..27615,29666..29726,31250..31310,31409..31492,31910..32104,32455..32534,33968..34064,34600..34718,34885..34954,35506..35597,36222..36423))] [gbkey=CDS]
Sequence

ATGGCGCCGGTGCCTGAGGAAACAACTGCGATAGATTACGTGATGGAGGCAGCTTCTGGT
GCACACTTTTCCGGTCTCCGATTTGATGGCCTTCTCACTTCTGGCTCTGCTTCTCCACGC
GCTTCTCCTACTCACACTCCCACGCACTTCTCCACCACTATCCCTCTTGATTCCACTACC
CCTAAACAGCCTTTCGTTATCGGGGTTTCTGGAGGTACAGCATCAGGTAAGACGACAGTG
TGTGACATGATCATCCAACAACTACACGATCATCGTGTCGTGCTTGTTAATCAGGATTCT
TTCTACCGCGGTTTGACGCCTGAAGAAATGAAACGTGTCCATGAGTATAATTTTGATCAT
CCAGATGCTTTTGACACTGAGCAGCTCTTAGAGTGCGTTGAAAAGTTAAAATCTGGCCTG
TCAGTCCAAGTCCCAATATATGACTTTAAAACCCATCAAAGATGTTCAGACAGCTTCCGC
CAGGTGAATGCATCTGATGTTATCATCTTGGAGGGTATTCTTGTTTTCCATGACTCGCGT
GTCCGCAATCTGATGAATATGAAGATTTTTGTTGATACAGATGCTGATGTGAGGCTTGCT
CGTAGAATAAGACGTGACACAGTGGAGAGGGGTAGAGACATAAACTCAGTACTTGAACAG
TATGCAAAGTTTGTCAAGCCCGCTTTTGATGACTTTGTTCTTCCTTCAAAGAAGTATGCT
GATGTTATCATTCCAAGGGGAGGTGATAATCATGTTGCTATTGATTTGATTACCCAACAT
ATTCGCACAAAACTTGGGCAGCATGATCTTTGCAAGATATATCCGAATGTGTATGTTATT
CAGTCGACTTTCCAGATTAGAGGTATGCATACACTAATTCGAGATAAAGATATTTCAAAG
CATGACTTTGTTTTTTATTCTGATCGGCTTATTCGTCTGGTTGTGGAGCATGGTCTTGGG
CATTTGCCCTTCACTGAGAAGCAAATAGTCACTCCAACAGGGTCAGTATACACCGGTGTT
GATTTTTGCAAAAAGTTGTGTGGAGTGTCCATTGTTCGAAGTGGTGAAAGTATGGAAAAT
GCACTTCGTGCTTGCTGCAAGGGTATTAAAATTGGGAAAATTCTGATCCACCGTGATGGT
GACAATGGGAAACAGCTTATATATGAAAAACTTCCAAAAGACATCTCAGAGCGGCACGTC
CTGCTTCTGGACCCGGTACTTGCTACAGGTAATTCGGCTAACCAGGCAATTGAGCTGCTC
ATACAGAAAGGAGTACCAGAATCCCACATTATTTTCCTAAATCTCATCTCTGCACCTGAG
GGAATACATTGTGTTTGCAAACGATTCCCCTCCTTAAAAATTGTCACGTCGGAGATTGAT
CTGGCTTTAAATGAAGAGTATCGTGTCATACCAGGTTTGGGAGAGTTTGGTGATCGTTAC
TTTGGCACTGATGATTGA

Peptide Sequence

PEP ID

XP_016503543.1
PEP Infomation

PREDICTED: uridine kinase-like protein 1, chloroplastic [Nicotiana tabacum]
Sequence

MAPVPEETTAIDYVMEAASGAHFSGLRFDGLLTSGSASPRASPTHTPTHFSTTIPLDSTT
PKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEEMKRVHEYNFDH
PDAFDTEQLLECVEKLKSGLSVQVPIYDFKTHQRCSDSFRQVNASDVIILEGILVFHDSR
VRNLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYA
DVIIPRGGDNHVAIDLITQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISK
HDFVFYSDRLIRLVVEHGLGHLPFTEKQIVTPTGSVYTGVDFCKKLCGVSIVRSGESMEN
ALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELL
IQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDLALNEEYRVIPGLGEFGDRY
FGTDD

Transcript Sequence

Gene sequence data has not been registered.